MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Escherichia coli 19428wD4_HM13

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from a total of 52 genomes

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NCBI Genome Annotation:

contigs: 110

bases: 5,033,648 bps

CDS: 4,754

rRNA: 21

tRNA: 78

tmRNA: 1

Total number of protein coding genes annotated/found: 4,625

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA)	Range ^	Gene Product Name
SEQF5033\|JADGMH010000022.1	MBF0792446.1	NA AA	9870/3290	35733-45602	contact-dependent inhibition effector tRNA nuclease
SEQF5033\|JADGMH010000019.1	MBF0792185.1	NA AA	9621/3207	52073-42453	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB
SEQF5033\|JADGMH010000025.1	MBF0792587.1	NA AA	9492/3164	22179-31670	yersiniabactin polyketide synthase HMWP1
SEQF5033\|JADGMH010000011.1	MBF0791336.1	NA AA	8052/2684	59463-51412	RatA-like protein
SEQF5033\|JADGMH010000019.1	MBF0792177.1	NA AA	6501/2167	28286-21786	colibactin non-ribosomal peptide synthetase ClbJ
SEQF5033\|JADGMH010000019.1	MBF0792176.1	NA AA	6465/2155	21775-15311	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbK
SEQF5033\|JADGMH010000025.1	MBF0792586.1	NA AA	6108/2036	15984-22091	yersiniabactin non-ribosomal peptide synthetase HMWP2
SEQF5033\|JADGMH010000024.1	MBF0792531.1	NA AA	5004/1668	1-5006	autotransporter domain-containing protein
SEQF5033\|JADGMH010000011.1	MBF0791349.1	NA AA	4962/1654	79677-74716	alpha2-macroglobulin
SEQF5033\|JADGMH010000019.1	MBF0792179.1	NA AA	4797/1599	36208-31412	colibactin non-ribosomal peptide synthetase ClbH
SEQF5033\|JADGMH010000013.1	MBF0791629.1	NA AA	4740/1580	99341-104080	YadA-like family protein
SEQF5033\|JADGMH010000017.1	MBF0791990.1	NA AA	4557/1519	19228-14672	lipoprotein metalloprotease SslE
SEQF5033\|JADGMH010000002.1	MBF0789033.1	NA AA	4515/1505	220990-216476	alpha-2-macroglobulin family protein
SEQF5033\|JADGMH010000008.1	MBF0790907.1	NA AA	4461/1487	162788-167248	glutamate synthase large subunit
SEQF5033\|JADGMH010000010.1	MBF0791203.1	NA AA	4461/1487	75474-79934	chromosome partition protein MukB
SEQF5033\|JADGMH010000019.1	MBF0792173.1	NA AA	4368/1456	12357-7990	colibactin non-ribosomal peptide synthetase ClbN
SEQF5033\|JADGMH010000001.1	MBF0788501.1	NA AA	4251/1417	120612-124862	intimin-like adhesin FdeC
SEQF5033\|JADGMH010000029.1	MBF0792736.1	NA AA	4224/1408	21673-17450	DNA-directed RNA polymerase subunit beta'
SEQF5033\|JADGMH010000001.1	MBF0788482.1	NA AA	4131/1377	100906-96776	vacuolating autotransporter toxin Vat
SEQF5033\|JADGMH010000029.1	MBF0792737.1	NA AA	4029/1343	25778-21750	DNA-directed RNA polymerase subunit beta

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Page last updated: July 7, 2021 08:39:35